Software from the Hodges lab

Hodges lab software links

Epigenomic workflows

Semi-automated Bash workflows for epigenomic analyses: RNA-seq, ChIP-seq, ATAC-seq, etc. Includes job-scheduling scripts for the Slurm scheduler.

Hodges lab common code

Common code used for R projects in the Hodges lab. Includes ggplot2 themes that permit specification of PostScript line width and other useful defaults.

If you are interested in the research we are doing, please contact Courtney for more information.

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